MendelSoft


MendelSoft is an open source software which detects marker genotyping incompatibilities (Mendelian errors only) in complex pedigrees using weighted constraint satisfaction techniques. The input of the software is a pedigree data with genotyping data at a single locus. The output of the software is a list of individuals for which the removal of their genotyping data restores consistency. This list is of minimum size when the program ends.

Another possibility is to find the most probable consistent correction with respect to a Bayesian formulation of the problem. In this case, the output of the software is a list of individuals for which predicted genotypes differ from their genotyping data and such that the corresponding joint probability for the whole problem is maximum


Informations générales
Informations spécifiques
Langage(s) de développement
C++
N° de version courante
V0.9.8
Date de la version courante
OS supporté
Type de licence
GPL


Porteur(s)
Unité
MIAT
Equipe
SaAB
Auteur(s)
de Givry S.
Schiex T.
Contact
simon.de-givry@inra.fr
Publication de référence


 

 

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